Manipal Academy of Higher Education has a separate hostel section under the management of Hostel Management Committee. This committee is headed by its Chairperson. The Chief Warden, MU, Manipal Campus, who is the secretary of the Committee administers the day to day aspects of the hostel management at Manipal. All the hostels of the University are divided into three campuses.
All the sports activities at Manipal Academy of Higher Education are conducted under the supervision of the University Sports Council headed by the Pro Chancellor as the Chairperson and Vice Chancellor as the Vice Chairperson of the council. The Deputy Registrar is the Secretary and the Registrar, Director (Student Affairs), Director (General Services), Director (Finance), Director (Projects) and all the Heads of constituent institutes and Directors of Physical Education are the members of this council.